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This document provides detailed rules and recommendations for naming phages in the SEA-PHAGES program, including restrictions on the use of certain characters, words, and naming conventions.
Year:
2023
Topic:
Phage Naming
Document Type:
Guidelines
Institution:
SEA-PHAGES
Target Audience:
Students, Researchers
Effective Period:
Ongoing
Approval Date:
Not specified
Changes Date:
Not specified
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Phage name:
Sorpresa
Document type:
Genome annotation submission cover sheet
Scientific field:
Actinobacteriophage genomics
Institution:
Brigham Young University
Author:
Jayden S. Longhurst
Contributor roles:
Student annotator
Quality control context:
SEA-PHAGES genome annotation review
Genes highlighted for review:
ORF 90, ORF 68
Genome features discussed:
Orphams, transposase, synteny rearrangement
Annotation tools referenced:
DNA Master, PECAAN, Aragorn, BLAST, PhagesDB
Submission purpose:
Quality control review of genome annotation
Source type:
Academic course-related scientific documentation
Phage name:
BenchScraper
Document type:
Genome annotation submission cover sheet
Subject area:
Actinobacteriophage genomics
Institution:
Southeastern Louisiana University
Author:
Justin Anderson
Primary email:
[email protected]
Correspondence email:
[email protected]
Quality control process:
SEA-PHAGES genome annotation QC review
Highlighted gene:
Gene 53
Annotation issues noted:
Integrase classification, HTH DNA-binding assignment, tRNA prediction confidence
Annotation tools mentioned:
DNA Master, PECAAN, Aragorn, tRNAscan-SE
Documentation methods:
PECAAN output, DNA Master shorthand, spreadsheet
External documentation link:
Google Sheets annotation log
Year:
2026
Institution:
University of Mary Washington
Location:
Fredericksburg, VA, USA
Event:
8th Annual SEA-PHAGES Symposium
Document Type:
Abstract
Corresponding Faculty Member:
Lynn Lewis ([email protected]
Note:
)
Authors:
Alexis N Robinson, Meredith D Snyder, Julia C Arrington, Rachel G Bellamy, Olivia C Blake, Robert C Byles, Samuel J Clark, Emily R Contompasis, Jacob N Ducey, Claire S Goode, Jenifer M Grove, Aidan M Hyland-Wood, Lynn O Lewis, Marion W Punches, Anna M Rinko, Sabrina L Sherman, Matthew A Tovar, Andrea G Zamora
Research Focus:
Isolation and genomic characterization of Bacillus phages
Phage Hosts:
Bacillus thuringiensis subsp. Kurstaki and Berliner
Number of Phages Isolated:
19
Sequenced Phages:
4
Notable Findings:
Identification of Di-ildio as potentially the largest Bacillus siphovirus discovered
Field:
Microbiology
Topic:
Bacteriophage quantification
Document type:
Laboratory protocol
Method:
Phage titer determination
Techniques described:
Full Plate Titer; Quick and Dirty Titer; Serial dilution; Spot test
Measured parameter:
Plaque Forming Units per milliliter (PFU/mL)
Host organism:
Mycobacterium smegmatis
Incubation temperature:
37 °C
Required materials:
Agar plates; MBTA; 7H9 medium with CaCl₂; phage buffer; micropipettes; serological pipettes; incubator
Experimental components:
Top agar plating mixture; phage lysate; dilution series (10⁻¹–10⁻¹⁰)
Observation method:
Plaque counting on agar plates
Recommended plaque range for calculation:
20–200 plaques
Output value:
Phage titer expressed in PFU/mL
Year:
2026
Organism:
Phage MisoSoup
Gene:
80
Protein type:
Amino acid sequence
Sequence length:
250 amino acids
Analysis method:
HHPRED
Matched protein:
S-adenosylmethionine synthase
Match probability:
100%
E-value:
0
Data type:
Molecular biology sequence
Year:
2025
Region / City:
Arkansas
Subject:
Commercial Permits
Document Type:
Checklist
Issuing Organization:
Bentonville City Planning Department
Target Audience:
Contractors, Architects, and Engineers
Effective Period:
September 2025
Approval Date:
September 2025
Amendment Date:
N/A
Test name:
Boston Naming Test
Document type:
Administration instructions
Test format:
Picture naming test
Number of items:
60
Short form length:
15 items
Associated examination:
Boston Diagnostic Aphasia Examination
Authors cited:
Mack, Freed, Williams, Henderson
Publication referenced:
Journals of Gerontology: Psychological Sciences
Year referenced:
1992
Target population:
Children, adults, aphasic patients
Administration time per item:
Up to 20 seconds
Cue types:
Stimulus cue, phonemic cue
Error coding system:
Paraphasic, semantic, phonemic, perceptual, neologistic, and other categories
Source type:
Neuropsychological test manual section
Program:
Workforce Innovation and Opportunity Act (WIOA) Title I
Jurisdiction:
Virginia Workforce Connection (VaWC)
Document type:
Administrative guidelines
Subject:
Document naming and tagging standards
Intended users:
Service providers and program staff
Application context:
WIOA Title I pre-application and participant file management
Scope:
Eligibility, enrollment, training, supportive services, outcomes, and exit documentation
Governing references:
USCIS, Selective Service, LWDB policies
Coverage:
Adult, Dislocated Worker, and Youth programs
Administrative level:
Local Workforce Development Areas
Source classification:
Program administration documentation
Year:
2019
Region / City:
University Park
Topic:
Door and Event Naming Standardization
Document Type:
Technical Standard
Organization / Institution:
Penn State University
Author:
Penn State Facilities and Planning
Target Audience:
University Staff
Date of Approval:
20191114
Date of Modification:
20191114
Year:
2013
Region / City:
Florida
Topic:
Data Administration
Document Type:
Guidelines
Organization / Institution:
Florida Department of Transportation
Author:
Florida Department of Transportation
Target Audience:
FDOT Data Analysts, Developers
Period of Validity:
Not specified
Approval Date:
2/1/2013
Date of Changes:
Not specified
Year:
1995
Region / City:
Overton/Pickett County
Topic:
Street Naming and Addressing Policy
Document Type:
Guidelines
Agency/Institution:
Overton/Pickett County E-911
Author:
Not specified
Target Audience:
Emergency service agencies, USPS, public
Period of Validity:
Ongoing
Approval Date:
Not specified
Amendment Date:
Not specified
Year:
2025
Region / City:
Bentonville, Arkansas
Subject:
Residential Permits
Document Type:
Guidelines
Organization:
Bentonville Planning Department
Author:
Bentonville Planning Department
Target Audience:
Contractors, builders, property developers, residential permit applicants
Effective Period:
Ongoing
Approval Date:
December 2025
Amendment Date:
Not specified
Year:
2025-2026
Region / City:
Springdale, Lexington County, South Carolina
Theme:
Legislation, Memorial Resolution
Document Type:
Legislative Resolution
Author:
Rep. Caskey
Target Audience:
Members of the South Carolina General Assembly, Department of Transportation
Action Period:
January 14, 2026 – Ongoing
Approval Date:
January 14, 2026
Date of Last Update:
January 29, 2026
Year:
2026
Region / City:
McCormick County, South Carolina
Document Type:
Concurrent Resolution
Sponsoring Bodies:
House of Representatives, Senate
Authors / Sponsors:
Reps. Gibson and McCravy
Subject:
Naming of bridge over Little River along US Highway 378
Date Introduced:
January 22, 2026
Committee:
House Committee on Invitations and Memorial Resolutions
Legislative Status:
Pending committee review
Target:
Department of Transportation
Year:
Insert text
Fund Manager:
Insert text
CSSF ID:
Insert text
Fund Name:
Insert text
Fund Form:
Insert text
Fund Type:
Insert text
Date of last prospectus version:
Insert text
Signatory Name and Position:
Insert text
Date of signature:
Select date
Sub-funds covered:
Insert text
Appendices:
Appendix 1, Appendix 2
Regulatory framework:
ESMA Guidelines on funds’ names, SFDR, SFDR RTS
Title:
Azure Naming and Tagging Quick Reference for SSC PBMM Virtual Data Centre
Organization:
Shared Services Canada (SSC)
Scope:
SSC PBMM Virtual Data Centre in Azure
Compliance Requirement:
Mandatory for resources deployed into SSC PBMM Virtual Data Centre in Azure
Related Standard:
SSC Naming and Tagging Standard for Azure detailed design specification (DDS)
Platform:
Microsoft Azure
Subject:
Cloud resource naming conventions and tagging governance
Applies To:
IaaS and PaaS resources, Azure Active Directory objects
Governance Fields:
Department code, Environment code, CSP and Region code
Environment Codes:
P (Production), D (Development), Q (Quality Assurance), S (Sandbox)
Regions:
Azure Canada Central, Azure Canada East
Naming Components:
Device type codes, resource owner string, resource type suffix
Tagging Standard:
ISO8601 GC date format; lowercase alphanumeric for governance tags
Mandatory Governance Tags:
Environment, Division, Classification, Owner, Contact, Cost Center
Year:
Not specified
Region / City:
Not specified
Topic:
Air handling units, Exhaust fans, Building automation
Document Type:
Standard
Organization:
Not specified
Author:
Not specified
Target Audience:
Engineers, designers, and building system planners
Effective Period:
Not specified
Approval Date:
Not specified
Modification Date:
Not specified
Year:
2003
Region / City:
Pennsylvania
Subject:
Oracle PL/SQL Coding Standards
Document Type:
IT Standard
Organization:
Health & Human Services Delivery Center
Author:
Gregory Staub, Chief Database Operations
Target Audience:
Database Administrators, IT Professionals
Effective Period:
Ongoing, with updates in 2020
Approval Date:
08/14/2003
Revision Date:
04/01/2020