№ lp_2_3_12089
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Supplementary material with data on patient characteristics and immune cell marker genes in PBMCs for research on immune cell heterogeneity in end-stage renal disease.
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The product description is provided for reference. Actual content and formatting may differ slightly.
Year:
2018
Region / city:
N/A
Topic:
Single-cell RNA sequencing
Document type:
Standard Operating Procedure (SOP)
Organization / institution:
Takara
Author:
N/A
Target audience:
Laboratory staff, researchers
Period of validity:
N/A
Approval date:
08/23/2018
Last review date:
8/27/2019
Year:
2023
Region / City:
Not specified
Topic:
Stemness index, single-cell analysis, embryonic stem cells
Document Type:
Research Supplementary Data
Organization / Institution:
Not specified
Author:
Hailong Zheng, Jiajing Xie, Kai Song, Jing Yang, Huiting Xiao, Jiashuai Zhang, Keru Li, Rongqiang Yuan, Yuting Zhao, Yunyan Gu, Wenyuan Zhao
Target Audience:
Researchers in stem cell biology, genomics, and bioinformatics
Effective Period:
Not specified
Approval Date:
Not specified
Modification Date:
Not specified
Institution:
IBGC, UMR 5095 CNRS
Team:
Bioinformatics team
Supervisors:
Dr. Macha Nikolski; Dr. Thomas Daubon
Position type:
Post-doctoral position
Duration:
12 months, extendable
Field:
Bioinformatics; Single-cell RNA sequencing; Glioblastoma research
Research focus:
White matter tract invasion in glioblastoma
Techniques:
Single-cell RNA sequencing; Bulk transcriptomics; NGS data analysis
Programming requirements:
R; Python; Unix environment
Language requirement:
English (spoken and written)
Required qualification:
PhD degree in bioinformatics, high level engineer or equivalent
Project context:
Integration of multiple scRNA-seq datasets from published and newly generated glioblastoma models
Subject area:
Molecular and metabolic pathways involved in tumor invasion
Authors:
Cassandra M. Juran; Justina Zvirblyte; Yasaman Sharazi; Angela Kubik; Margareth Cheng-Campbell; Elizabeth Blaber; Eduardo Almeida
Affiliations:
Blue Marble Space Institute of Science at NASA Ames Research Center, Mountain View, CA, USA; Vilnius University, Vilnius, Lithuania; Rensselaer Polytechnic Institute, Troy, NY, USA; NASA Ames Research Center, Moffett Field, CA, USA
Research Field:
Stem cell biology; Bone regeneration; Mechanobiology; Space biology
Key Gene:
CDKN1A (Cdkn1a)
Experimental Models:
Wildtype and Cdkn1a-null mice
Methods:
Single-cell mRNA sequencing; in-vitro mechanical stretch; hindlimb unloading; running wheel and treadmill loading; spaceflight microgravity exposure
Space Mission:
Rodent Research-10 aboard the International Space Station
Duration of Spaceflight:
30 days
Biological Material:
Femur bone marrow; mesenchymal osteoprogenitors; osteoblast lineage cells
Type of Document:
Scientific research article
Institutional Context:
NASA-affiliated and academic biomedical research collaboration
Year:
2024
Region / City:
Bodø, Norway; Edinburgh, Scotland; Barcelona, Spain
Subject:
Reproductive endocrinology, teleost puberty
Document type:
Research article
Institution:
Nord University, The Roslin Institute, Institute of Marine Science (ICM)
Authors:
L. Colonna, I. Konstantinidis, R.R. Daniels, D. Robledo, J.M.O. Fernandes
Target audience:
Researchers in marine biology and fish physiology
Methodology:
Single-cell RNA-seq and ATAC-seq profiling
Model organism:
Nile tilapia (Oreochromis niloticus)
Experimental conditions:
Continuous and ambient light exposure for 4 months
Purpose:
Identification of pituitary cell types and markers associated with puberty onset in teleosts
Reference:
M. Li, L. Sun, L. Zhou & D. Wang (2024). Gen Comp Endocrinol 345:114395
Year:
2026
Institution:
University X
Type of document:
Research Data Management Plan
Research focus:
Single-cell genomics
Organ / department:
Office of Sponsored Programs
Data repository:
BRAIN Initiative Cell Data Center (BCDC), NeMO, NCBI GEO, SRA
Target species:
Mouse, Human
Data modalities:
ATAC-seq, RNA-seq, DNA methylation
Standards:
NeMO standards for single-cell data
Data access:
Public release upon publication or milestone completion
Validation schedule:
Milestone-based data freeze and analysis
Year:
2017
Region / City:
Not specified
Theme:
Network meta-analysis, quality assessment, heterogeneity
Document Type:
Research study
Organization / Institution:
Not specified
Author:
Not specified
Target Audience:
Researchers, clinicians
Period of validity:
Not specified
Approval Date:
Not specified
Modification Date:
Not specified
Context:
Network meta-analysis examining the quality and heterogeneity of studies on hip replacement outcomes.
Year:
Not specified
Field:
Computer Networks
Topic:
Quality of Service, Traffic Identification, Network Performance
Document Type:
Academic conference paper
Institutions:
Central Lab. for Agricultural Expert Systems, Agricultural Research Center, Egypt; Faculty of Computers and Information, Cairo University
Authors:
Tarek Heggi; Maryam Hazman; Fathy Amer
Author Affiliations:
Agricultural Research Center, Egypt; Cairo University
Keywords:
IP networks; Performance management; Quality of Service; Traffic Identification; Simulation
Research Focus:
Impact of heterogeneity on network and application performance in IP networks
Core Concepts:
Quality of Service (QoS); Quality of Experience (QoE); traffic classification; network measurement
Methodological References:
deterministic and stochastic approaches; analytical and simulation models; machine learning classification
Technologies Mentioned:
DiffServ; IntServ; Multi Protocol Label Switching (MPLS); Autonomic Computing; Weka
Classification Techniques Discussed:
port-based; payload-based; behavioral-based; multilevel classification
Year:
2012–2018
Region:
International
Topic:
Inflammatory Bowel Disease, Meta-Analysis
Document Type:
Supplementary Tables
Institution:
Multiple Clinical Research Centers
Authors:
Sebkova, Vadan, De Vos, Molander, Dai, Echarri, Yu, Magro, Pinetun de Chambrun, Prymak, Zhang, Kaymak, Kumar, Munoz-Villafranca
Target Audience:
Clinicians and researchers in gastroenterology
Period Covered:
8 weeks to 2 years follow-up
Data Source:
Published studies included in meta-analyses
Assessment Tool:
Newcastle-Ottawa Scale (NOS)
Statistical Tests:
χ2-test, I2-test
Year:
2023
Region / Country:
Rwanda
Topic:
Social protection and livelihood trajectories
Document type:
Research paper
Institution / Organization:
Institute of Development Studies, University of Sussex; University of Cambridge
Authors:
Rachel Sabates-Wheeler, Ricardo Sabates, Stephen Devereux
Funder:
Concern Worldwide
Keywords:
social protection, heterogeneity, livelihoods, graduation, poverty
Target population:
Programme participants in Rwanda
Data source:
Panel survey from NGO-implemented graduation programme
Period covered:
During and post-programme implementation
Key findings:
Household characteristics, location, shock type, and resource complementarities influence livelihood trajectories
Year:
2023
Region / City:
Not specified
Subject:
Mendelian Randomization analysis of metabolites
Document Type:
Research Data
Institution:
Not specified
Author:
Not specified
Target Audience:
Researchers in the field of genetic epidemiology
Period of Validity:
Not specified
Approval Date:
Not specified
Date of Last Update:
Not specified
Year:
2026
Field:
Cancer research, spatial transcriptomics
Document type:
Supplementary data / Methods
Authors:
Sammy Ferri-Borgogno, Ying Zhu, Jianting Sheng, Jared K. Burks, Javier Gomez, Kwong Kwok Wong, Stephen T.C. Wong, Samuel C. Mok
Institution:
Unspecified (data from GEO database and previous publications)
Sample:
High-grade serous ovarian cancer patients
Techniques:
scRNA-seq, spatial transcriptomics, UMAP, PCA, GO enrichment analysis
Data source:
GEO database
Cell types analyzed:
Epithelial cells, fibroblasts, endothelial cells, T cells, B cells, myeloid cells, NK cells, dendritic cells, monocytes, macrophages
Analysis period:
Not specified
Methodology details:
Differential expression analysis, cluster annotation, ligand-receptor interaction assessment
Year:
2026
Region / City:
Not specified
Topic:
Cancer research
Document type:
Supplementary Materials
Institution:
Not specified
Authors:
Jianzhen Lin, Bo Hu, Yang Shi, Jiaqian Wang, Xu Yang, Weikang Hu, Xiaobo Yang, Xin Lu, Xinting Sang, Zhibo Gao, Ruibin Xi, Haitao Zhao
Target audience:
Medical researchers, Oncologists
Period of validity:
Not specified
Approval date:
Not specified
Date of amendments:
Not specified
Note:
Contextual description