№ files_lp_4_process_2_57745
Supplementary methodological description of laboratory staining procedures, imaging protocols, sequencing workflows, and computational analyses used to characterize immune cell infiltration and genomic variation in tumor biopsy samples.
Document type: Supplementary methods section
Scientific field: Molecular medicine and tumor immunology
Techniques described: Immunofluorescence histology, multiplex antibody staining, next-generation sequencing
Biological material: Tumor biopsy FFPE tissue sections
Immune markers analyzed: CD8+, CD4+, Granzyme B
Sequencing platforms: Illumina NovaSeq 6000
Bioinformatics tools: trim_galore, STAR, featureCounts, DESeq2, GATK HaplotypeCaller, MuTect, Vardict
Genome reference: Human genome hg38 with appended ONCOS-102 genome
Imaging equipment: Panoramic 250 FLASH whole-slide scanner
Institutions mentioned: Institute for Molecular Medicine Helsinki; Personalis Inc., California, USA
Sample preparation: 3.5 μm FFPE tissue sections
Staining reagents: TSA 647, TSA 750, DAPI nuclear stain
Analysis focus: Detection and quantification of immune cell infiltrates and differential gene expression in tumor biopsies
Price: 8 / 10 USD
The file will be delivered to the email address provided at checkout within 12 hours.

Don’t have cryptocurrency yet?

You can still complete your purchase in a few minutes:
  1. Buy Crypto in a trusted app (Coinbase, Kraken, Cash App or any similar service).
  2. In the app, tap Send.
  3. Select network, paste our wallet address.
  4. Send the exact amount shown above.
After sending, paste your TXID (transaction ID) and your email to receive the download link. Need help? Contact support and we’ll guide you step by step.