№ files_lp_4_process_3_067438
File format: docx
Character count: 9120
File size: 28 KB
Year:
2023
Region / country:
Mexico, USA
Subject:
Botany, Phylogenetics, Palynology
Document type:
Supplementary material
Institution / organization:
Herbarium collections (B, MEXU, ARIZ, ISC)
Authors:
Müller, Borsch, Flores Olvera, Ochoterena, Torres, Van Devender, Steinmann, Zumaya, others
Target audience:
Researchers in plant systematics and molecular phylogenetics
Data included:
Taxon name, authority, DNA sample identifier, collection locality, collector, herbarium number, sequence accession numbers, pollen specimens
Time period of data:
Various collection dates up to 2023
Sequence sources:
Newly generated sequences, previously published sequences from Müller & Borsch (2005), Flores-Olvera et al. (2016), Borsch et al. (2018)
Notation:
§ indicates type specimen sequence, “pollen” denotes specimens used for SEM study
Price: 8 / 10 USD
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The product description is provided for reference. Actual content and formatting may differ slightly.
Year:
2025
Region / city:
Peninsular India
Subject:
Palynology, Taxonomy, Botanical Morphology
Document Type:
Research Article
Institution:
Unspecified
Author:
Unspecified
Target Audience:
Botanists, Taxonomists, Palynologists
Period of validity:
Unspecified
Date of approval:
Unspecified
Date of changes:
Unspecified
Year:
2021
Region:
Puebla
Subject:
Plant taxonomy, ecology
Document type:
Supplementary material
Institution:
UAMIZ
Authors:
F. A. Onofre-Vivar et al.
Target audience:
Researchers, Botanists
Period of validity:
Not specified
Date of approval:
Not specified
Date of modifications:
Not specified
Contextual description:
A supplementary material detailing voucher specimens of Mimosa species, including their collection data, geographical coordinates, and ecological information.
Year:
2025
Region / city:
Peninsular India
Subject:
Palynology, Taxonomy, Plant Morphology
Document Type:
Original Research Article
Organization / Institution:
Not specified
Author:
Not specified
Target Audience:
Researchers, Botanists, Taxonomists
Period of validity:
N/A
Approval Date:
N/A
Date of changes:
N/A
Year:
2019
Region / city:
Not specified
Theme:
Taxonomy
Document type:
Proposal
Organization / institution:
ICTV
Author:
Kropinski AM, Adriaenssens EM
Target audience:
ICTV Subcommittee Chair, virus taxonomy specialists
Period of validity:
Not specified
Approval date:
Not specified
Date of revisions:
Not specified
Year:
2023
Region / city:
Southern China
Topic:
Forest Ecology, Anthropogenic Disturbance, Biodiversity
Document type:
Full length article
Organization / institution:
State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Aarhus University, Zhejiang Normal University, University of Exeter
Author:
Gang Feng, Jens-Christian Svenning, Xiangcheng Mi, Jia Qi, Mide Rao, Haibao Ren, Daniel P. Bebber, Keping Ma
Target audience:
Researchers in ecology, environmental science, and biodiversity
Period of validity:
N/A
Approval date:
N/A
Date of changes:
N/A
Keywords:
Chinese subtropical forest, disturbance, phylogenetic community structure, functional structure, environmental filtering, successional stages
Year:
1837
Institution:
Charles Darwin’s notebook / State University at Yorkville Department of Biology
Type of Document:
Educational scenario and assessment
Topic:
Evolutionary relationships and phylogenetic analysis
Intended Audience:
Biology students / Intern applicants
Tasks Included:
Diagnostic assessment, character matrix, phylogenetic tree construction, dichotomous key exercises, DNA sequence analysis
Resources:
CARD SET A, CARD SET B, NCBI database, Phylogeny.fr
Author:
Charles Darwin (illustration), Dr. Wallace-Darwin (assessment coordinator)
Scope:
Laboratory exercises and application for internship in evolutionary biology course
Year:
2021
Region / City:
N/A
Subject:
Phylogenetic analysis, evolutionary biology
Document type:
Research article
Institution:
N/A
Author:
Zachary T. Calamari
Target audience:
Researchers in evolutionary biology, taxonomy, and related fields
Period of validity:
N/A
Approval date:
N/A
Date of changes:
N/A
Year:
2023
Region / City:
Not specified
Topic:
Phylogenetic analysis, protein sequences
Document Type:
Research data
Institution:
Not specified
Author:
Not specified
Target Audience:
Researchers, scientists
Effective Period:
Not specified
Approval Date:
Not specified
Modification Date:
Not specified
Context:
This document contains protein sequences used for phylogenetic analysis across various plant species, with the focus on the FPPS gene in different species.
Year:
2005-2013
Region / City:
USA, Italy, Korea, Japan, Brazil, China
Topic:
Molecular Genetics, Rotavirus
Document Type:
Supplementary Data
Institution:
N/A
Author:
N/A
Target Audience:
Researchers, Molecular Biologists
Period of validity:
N/A
Approval Date:
N/A
Date of modification:
N/A
Year:
Not specified
Region / city:
Not specified
Theme:
Molecular biology, microbiology, genetics
Document type:
Research article
Organization / institution:
Not specified
Author:
Not specified
Target audience:
Researchers, microbiologists
Period of validity:
Not applicable
Approval date:
Not specified
Modification date:
Not specified
Year:
2026
Region / city:
Global
Topic:
Phylogenetics, Contracaecum species, genetic distances
Document type:
Supplementary material
Organization / institution:
Not specified
Author:
Not specified
Target audience:
Researchers in molecular biology and taxonomy
Validity period:
Ongoing research
Approval date:
Not provided
Date of changes:
Not provided
Note:
Context
Year:
2025
Region / Country:
Brazil, Argentina, USA, Ecuador, Bolivia, Paraguay, Chile, Panama, Honduras, Mexico, Guatemala, Suriname, Venezuela, Netherlands Antilles, Martinique, Barbados, Taiwan
Subject:
Molecular phylogenetics, Chiroptera
Document type:
Appendix / Supplementary data
Institution / Museum:
Fiocruz Mata Atlântica, Museo Provincial de Ciencias Naturales Dr. Ángel Gallardo, Carnegie Museum of Natural History, Field Museum of Natural History, Museum of Southwestern Biology, Museum of Vertebrate Zoology, University of Nebraska State Museum, Sam Noble Oklahoma Museum of Natural History, Smithsonian’s National Museum of Natural History, Texas Tech University, Pontificia Universidad Católica del Ecuador, Biology Department of Tunghai University
Authors:
Larsen et al., Novaes et al., Ruedi and Mayer, Stadelmann et al., Carrión-Bonilla and Cook, Platt et al., Caraballo et al.
Specimen data:
Voucher numbers and collection localities for Myotis species
Data source:
GenBank sequences and re-identified specimen data
Coverage period:
2001–2025
Methodology:
DNA sequencing of cytochrome-b gene for phylogenetic analysis
Scientific relevance:
Supports taxonomic verification and evolutionary studies of Myotis bats
Year:
2016
Scientific field:
Entomology
Research topic:
Molecular phylogeny of Bibionomorpha sensu lato (Diptera)
Document type:
Supplementary data table
Content type:
Species list for phylogenetic analysis
Authors:
J. Ševčík; D. Kaspřák; M. Mantič; S. Fitzgerald; T. Ševčíková; A. Tóthová; M. Jaschhof
Taxonomic group:
Infraorder Bibionomorpha (Diptera)
Specimen information:
Mostly male specimens unless stated otherwise
Identification:
Specimens identified by the authors
Data fields:
Species; Authors; Sampling locality and year; Collection
Geographic coverage:
Brunei; Thailand; Czech Republic; Slovakia; Malaysia; USA; Chile; New Zealand; French Guyana; India; Peru; Finland; Georgia; Turkey
Sampling period:
2000–2015
Collections referenced:
Jan Ševčík Lab, University of Ostrava (JSL-UOC); Silesian Museum, Opava (SMOC)
Institutional affiliation:
University of Ostrava; Silesian Museum, Opava
Year:
2023
Region:
Brazilian Atlantic Forest, South America
Topic:
Biodiversity conservation, freshwater turtles
Document type:
Supplementary data appendix
Institution:
Universidade Federal do Rio de Janeiro
Authors:
Rhodin et al., Vogt et al., Bernils et al.
Species covered:
Chelonoidis carbonarius, Chelonoidis denticulatus, Kinosternon scorpioides, Rhinoclemmys punctularia, Trachemys dorbigni, Acanthochelys radiolata, Acanthochelys spixii, Hydromedusa maximiliani, Hydromedusa tectifera, Mesoclemmys hogei, Mesoclemmys tuberculata, Mesoclemmys vanderhaegei, Phrynops geoffroanus, Phrynops hilarii, Phrynops williamsi
Functional traits analyzed:
Body size, habit, activity, diet, environment, habitat
Data sources:
Published literature and species distribution records
Geographic details:
Brazilian states including RS, SC, PR, MS, SP, GO, MG, RJ, ES, BA, SE, AL, PE, PB, RN; Serra do Mar, Serra da Mantiqueira, Central Corredor, Pernambuco Endemism Center
Tables included:
Species distribution, functional traits, ecosystem functions
Figures included:
Original distribution of Brazilian Atlantic Forest hotspot
References:
Junk 1997; Van Dijk et al. 2014; Vitt and Caldwell 2014; Sobral-Sousa et al. 2017; Staford et al. 2018; additional primary sources for species data
Year:
2026
Species:
Avena sativa
Gene family:
Csl (Cellulose synthase-like)
Type of document:
Supplementary data
File format:
Excel
Methods:
RT-qPCR, gene isolation, phylogenetic analysis
Gene sequences:
AsCslF3, AsCslF4, AsCslF6, AsCslF8, AsCslF9, AsCslH, AsCslJ
Data content:
Primer sequences, product sizes, sequence identity percentages, protein motifs
Experimental conditions:
Light treatments for protein expression analysis
Phylogenetic comparison:
Barley, Brachypodium, rice, sorghum
Analytical software:
MEGA7
Endogenous controls:
EF1α, PP2A
Document Type:
Educational assignment
Subject Area:
Evolutionary Biology
Topic:
Phylogenetic Trees and Cladograms
Educational Level:
Secondary School Biology
Activity Format:
Portfolio Activity
Duration:
Three Days
Organism Focus:
Imaginary Species “Xenites”
Scientific Concepts:
Phylogenetic Analysis, Evolutionary Relationships, Fossil Record, Homology and Analogy
Tasks Included:
Character Matrix Completion, Cladogram Construction, Evolutionary Interpretation, Reflection Questions
Materials Referenced:
Assignment Pages 3, 4, 7, and 8
Year:
2015
Field:
Molecular biology; microbiology; phylogenetics
Subject:
Parabasalia and trichomonad phylogeny based on rRNA loci
Document type:
Supplementary scientific material
Content elements:
Phylogenetic trees; primer table; BLAST alignment results; sequence alignments
Methods:
Maximum likelihood phylogenetic analysis; BLAST sequence comparison
Genetic markers:
18S rRNA; ITS1-5.8S rRNA-ITS2
Organisms studied:
Tetratrichomonas spp.; parabasalia; trichomonads
Host organisms mentioned:
Cattle (bovine hosts)
Data sources:
GenBank sequence accessions; cattle gastrointestinal metatranscriptome datasets
Figures:
Figure S1; Figure S2
Tables:
Table S1; Table S2
Supplementary files:
S1–S4 sequence alignments
Primer information:
Oligonucleotide primers with forward and reverse sequences
Key references cited:
Hadziavdic et al. (2014); Malik et al. (2011); Cepicka et al. (2010); Benson et al. (2015)
Year:
2010
Region / location:
Sichuan and Gansu, China
Research focus:
Molecular phylogenetics and species delimitation
Document type:
Supplementary tables for a scientific study
Organ / institution:
Not specified
Authors:
He et al., Poux and Douzery, Lecompte et al.
Genetic markers:
CYT B, IRBP, GHR
Species studied:
Eozapus vicinus, Eozapus setchuanus, Eremodipus lichtenstein, Jaculus spp., Dipus sagitta, Orientallactaga sibirica, Euchoreutes naso, Allactaga major, Stylodipus spp., Chimaerodipus auritus
Data source:
GenBank accession numbers
Methods:
PCR primers, sequencing, jModeltest phylogenetic models, BPP species delimitation, cranial measurements
Sampling period:
Not explicitly stated
Geographic coordinates:
Not provided