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Supplementary scientific dataset presenting taxonomic identification and sequence abundance of microbial operational taxonomic units detected in different compartments of the digestive tract of Brisaster townsendi.
Document type: Supplementary scientific data table
Subject area: Microbiology; Marine biology; Microbial ecology
Biological subject: Brisaster townsendi
Data type: OTU abundance counts and taxonomic identification
Taxonomic ranks included: Phylum; lowest taxonomic level
Sample source: Digestive tract of Brisaster townsendi
Sample sections: Stomach; Intestine; Intestinal caecum; Rectum
Number of stomach samples: 2
Number of intestine samples: 2
Number of intestinal caecum samples: 12
Number of rectum samples: 2
Minimum sequence threshold: 2,000 sequences per OTU
Measured variable: Sequence abundance per OTU across digestive tract compartments
Taxonomic groups represented: Bacteroidetes; Deltaproteobacteria; Gammaproteobacteria; Alphaproteobacteria; Epsilonproteobacteria; Patescibacteria; Spirochaetes; Unassigned
Identifiers used: Operational Taxonomic Unit (OTU) numbers
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Appendix I – List of Operational Taxonomic Units (OTUs) recovered from fish gut contents
Year: 2009
Source type: Scientific appendix
Subject: Fish diet analysis, gut content metabarcoding
Organism focus: Paracirrhites arcatus, Neocirrhites armatus, Caracanthus maculatus
Data type: OTU table with sequence counts
Method: DNA sequencing, BLASTn, Bayesian assignment
References: Machida et al., 2009; Plaisance et al., 2009
Additional resources: BIOCODE reference specimens (http://biocode.berkeley.edu
Note: )
Taxonomic groups: Polychaeta, Malacostraca, Maxillopoda
Topics: Brisaster townsendi OTUs