№ files_lp_3_process_9_09865
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Supplementary source detailing field trials, microbial sampling, sequencing methods, and functional network analyses of bacterial and fungal communities across maize developmental stages in different ecological niches.
Year:
2016
Region / City:
XC (Northern China), QJ (Southwest China)
Subject:
Plant microbiomes, microbial ecology, fertilization effects
Document Type:
Supplementary Information
Institution:
State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences; University of Chinese Academy of Sciences; Western Sydney University; Henan Agricultural University; Soil and Fertilizer Station of Qilin District
Authors:
Chao Xiong, Brajesh K. Singh, Ji-Zheng He, Yan-Lai Han, Pei-Pei Li, Li-Hua Wan, Guo-Zhong Meng, Si-Yi Liu, Jun-Tao Wang, Chuan-Fa Wu, An-Hui Ge, Li-Mei Zhang
Target Audience:
Plant microbiologists, ecologists, agronomists
Experimental Sites:
XC and QJ
Crop Species:
Zea mays (Zhengdan 958 at XC, Shidan 8 at QJ)
Treatments:
Control, N, 80%N, 80%NS, 80%NI, 80%NKle, 80%NSB
Sampling Stages:
Seedling, tasseling, mature
Sample Types:
Rhizosphere soil, bulk soil, phylloplane, plastic leaf, maize grain
Molecular Methods:
16S rRNA gene and ITS2 region sequencing
Data Analysis:
Alpha and beta diversity, regression, network analysis, functional prediction
Price: 8 / 10 USD
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Year:
2021
Region / city:
Global
Topic:
Fungal ecology, functional traits, plant-fungi interaction
Document type:
Research Article
Institution:
George Washington University, University of Tartu, University of Miami, Freie Universität-Berlin, Purdue University Northwest, Boston University, Oregon State University, University of Illinois Urbana-Champaign, University of New South Wales, ETH Zurich, University of Minnesota, Lund University, University of Florida, Clark University, University of Gothenburg, Western Sydney University, University of California Irvine
Author:
Amy E. Zanne, Kessy Abarenkov, Michelle E. Afkhami, Carlos A. Aguilar-Trigueros, Scott Bates, Jennifer M. Bhatnagar, Posy E. Busby, Natalie Christian, William K. Cornwell, Thomas W. Crowther, Habacuc Flores-Moreno, Dimitrios Floudas, Romina Gazis, David Hibbett, Peter Kennedy, Daniel L. Lindner, Daniel S. Maynard, Amy M. Milo, R. Henrik Nilsson, Jeff Powell, Mark Schildhauer, Jonathan Schilling, Kathleen K. Treseder
Target Audience:
Ecologists, biologists, mycologists, researchers in fungal functional ecology
Period of validity:
Ongoing
Approval Date:
Not mentioned
Modification Date:
Not mentioned
Year:
2015
Region / City:
N/A
Theme:
Molecular Ecology, Fungal Studies
Document Type:
Research Protocol
Organization:
Kennedy Lab
Authors:
Nhu Nguyen, Peter Kennedy
Target Audience:
Researchers in molecular ecology and fungal studies
Effective Period:
N/A
Approval Date:
N/A
Date of Changes:
April 22, 2015
Year:
Not specified
Region / City:
Not specified
Topic:
Diabetes, fungal infections, metformin, PTP1B inhibitors, Candida albicans
Document Type:
Research Project Report
Author:
Not specified
Target Audience:
Researchers, medical professionals
Duration:
Not specified
Approval Date:
Not specified
Date of Changes:
Not specified
Document Type:
Invitation template
Topic:
Fungal infections and their treatment
Purpose:
Preparation of patient-oriented scientific summaries
Target Audience:
Patients and caregivers
Contributors:
Scientists, clinicians, young fellows
Review Process:
Expert review prior to publication
Length Recommendation:
2 to 3 pages
Language Policy:
Translation into multiple languages
Organizing Contact:
[email protected]
Suggested Content Sections:
Scientific background; diagnostic approaches; treatment; current research and clinical trials; patient experience; images; references
Referenced Organizations:
Aspergillosis Patient & Carer Support; Mycology Advocacy, Research & Education (MYCARE) Foundation; Gaffi Education; Fungus Education Hub
Document Type:
Academic assignment template
Project Title:
Ecology Project Benchmark #3
Course Context:
Lab Unit 4.1 Leaf Herbivory and Fungal Occurrences on Trees
Mode:
Online Work Week
Institutional Platform:
Lab Website
Collaboration Format:
Group work in shared Google Drive folder
Subject Area:
Ecology
Focus:
Leaf herbivory and fungal occurrences on trees
Required Components:
Compiled baseline data, advanced data representation, description and discussion of findings, references in CSE citation format
Submission Requirement:
Due date assigned by lab section and lab group
Document Type:
Original Research Article
Study Area:
Akwa Ibom State, Southern Nigeria
Ecosystems Examined:
Mangrove, Freshwater Swamp, Cropland, Lowland Forest, Derived Savanna, Dumpsite
Institution:
International Institute of Tropical Agriculture (IITA), Ibadan
Subject Area:
Soil Microbiology and Tropical Ecology
Focus Organisms:
Arbuscular Mycorrhizal Fungi (Glomeromycota)
AMF Taxa Identified:
Acaulospora spp., Rhizophagus spp., Glomus spp., Gigaspora spp., Funneliformis spp.
Soil Parameters Assessed:
pH, Electrical Conductivity, Organic Carbon, Total Nitrogen, Available Phosphorus, Exchangeable Cations, Soil Texture
Sample Scope:
28 Plant Species Across Multiple Families
Methodology:
Spore Morphological Identification and Root Colonization Assessment
Keywords:
AMF, Physicochemical Properties, Root Colonization, Tropical Ecosystems, Land-Use Systems
Geographic Focus:
Southern Nigeria
Document type:
Supplementary tables
Subject:
Soil microbial community composition
Scientific field:
Microbial ecology
Content focus:
Abundance of bacterial and fungal phyla
Measured parameter:
Sum abundance (%)
Sample size:
n = 5
Organisms studied:
Bacterial phyla; fungal phyla
Plant species:
Quercus acutissima; Pinus massoniana
Sample environments:
Rhizosphere soil; non-rhizosphere soil
Forest types:
Quercus acutissima forest; Pinus massoniana forest; mixed Quercus acutissima and Pinus massoniana forest
Data structure:
Ranked phyla by descending sum abundance
Bacterial phyla listed:
Proteobacteria; Acidobacteria; Actinobacteria; Verrucomicrobia; Candidatus Rokubacteria; Chloroflexi; Candidatus Eremiobacteraeota
Fungal phyla listed:
Basidiomycota; Ascomycota; Mucoromycota
Table sections:
R-QA; Non-QA; R-PM; Non-PM; R-Mix; Non-Mix
Measurement unit:
Percentage (%)
Year:
2026
Region:
Not specified
Subject:
Soil fungal biomass and community composition under heating and nitrogen treatments
Document type:
Supplementary material for scientific study
Institution:
Not specified
Authors:
Not specified
Target audience:
Researchers in soil microbiology and ecology
Period of study:
Not explicitly stated
Data type:
Quantitative measurements of fungal biomass and diversity
Methods:
PLFA, NLFA, ANOVA, PERMANOVA, Shannon diversity, richness, evenness analyses
Factors analyzed:
Heating, Nitrogen, Interaction (Heating × Nitrogen)
Fungal groups:
Total fungi, AMF (arbuscular mycorrhizal fungi), EMF (ectomycorrhizal fungi), Saprotrophs, Pathotrophs
Soil types:
Organic horizon, Mineral horizon
Year:
2026
Organization:
Lancaster University
Department:
Department of Environmental Science / Ecology
Document Type:
Job specification
Position:
Senior Research Associate
Field:
Plant-fungal-soil interactions, microbial ecology
Qualifications Required:
PhD in relevant field
Skills:
Laboratory analysis, statistical analysis in R, experimental design, data collection and analysis, scientific communication
Experience:
Peer-reviewed publications, fieldwork, knowledge exchange, supervision of students and technicians
Application Components:
CV, covering letter, application form
Location:
United Kingdom
Travel Requirements:
Fieldwork and meetings across the UK
Contract Type:
Academic / Research position
Assessment Methods:
Application review, supporting statement, interview, potential skills test or presentation
Year:
2015
Region / city:
Global
Topic:
Infectious diseases, sepsis, viral and bacterial co-infections
Document type:
Scientific article
Organization / institution:
Various medical institutions and researchers
Author:
Multiple authors
Target audience:
Medical professionals, researchers in infectious diseases
Effective period:
N/A
Approval date:
2015
Modification date:
N/A
Year:
2026
Region:
Not specified
Subject:
Microbial and fungal distribution
Document type:
Dataset
Institution:
Not specified
Author:
Not specified
Target audience:
Researchers in microbiology and environmental science
Experiment period:
Not specified
Measured variables:
Bacterial species, fungal species, treatment conditions, iron levels, water content
Year:
2023
Region / Country:
The Netherlands
Topic:
Airborne fungal pathogens, azole resistance
Document type:
Supplementary text / press release / participant instructions
Institution:
Wageningen University & Research
Collaborating institutions:
RIVM, Radboud UMC
Author:
WUR Research Team
Target audience:
General public and citizen scientists
Project period:
October 1 – November 12, 2023
Deadline for sample return:
December 1, 2023
Research visibility platforms:
Twitter/X @Schimmelradar
Sampling method:
Delta trap with sticky seals
Purpose:
Mapping azole resistance in Aspergillus fumigatus across regions
Year:
2026
Region / City:
Baghdad, Iraq
Topic:
Type 2 Diabetes Mellitus, Periodontal Disease, Fungal Infections, Obesity, Inflammation
Document Type:
Research Article
Institution:
Gilgamesh University, College of Health and Medical Techniques
Authors:
Mohammed Mohaibes, Ammar Sabar, Mayada Al-khafaji
Target Audience:
Medical researchers, clinicians, and healthcare professionals
Study Design:
Case-control study
Sample Size:
150 participants (75 T2DM patients, 75 healthy controls)
Methods:
Oral swabs, blood analysis for CRP and ESR, fungal isolation via microscopy, culture, VITEK® 2 system
Period:
Not explicitly stated
Publication Status:
Preprint / Manuscript
Keywords:
Type 2 Diabetes Mellitus, Periodontal disease, Fungal infection, Obesity, Inflammation, CRP, ESR
Correspondence:
[email protected]
Year:
2021
Region / City:
United Kingdom
Subject:
Health economics, antimicrobial evaluation
Document type:
Final report
Organization / Institution:
Centre for Health Economics, University of York; Health Economics and Decision Science, University of Sheffield
Author:
Sue Harnan, Ben Kearns, Alison Scope, Laetitia Schmitt, Dina Jankovic, Jean Hamilton, Ruth Wong, Tushar Srivastava, Harry Hill, Chu Chang Ku, Kate Ren, Claire Rothery, Laura Bojke, Mark Sculpher, Beth Woods
Target audience:
Healthcare professionals, policymakers, researchers
Period of validity:
2016 - ongoing
Approval date:
October 2021
Date of last modification:
October 2021
Document type:
Supplementary material
Scientific field:
Molecular biology
Research focus:
Anticalin selection and affinity maturation
Target protein:
Membrane-bound Hsp70
Methodology:
Bacterial surface display
Techniques:
FACS screening, affinity maturation, directed evolution, SPR, CD spectroscopy, flow cytometry
Biological models:
E. coli, FaDu cells, OPM-2 cells
Authors:
Lars Friedrich; Petra Kornberger; Claudia T. Mendler; Gabriele Multhoff; Markus Schwaiger; Arne Skerra
Figures included:
Figures S1–S7
Related publication:
Main research article on Anticalin selection against Hsp70
Experimental scope:
In vitro binding analysis and cellular characterization
Document type:
Laboratory exercise instructions
Subject area:
Microbiology
Educational level:
Undergraduate laboratory
Focus:
Bacterial growth media and culturing techniques
Topics covered:
Normal flora, aseptic technique, selective and differential media, colony morphology, hemolysis
Media discussed:
TSY agar, MacConkey’s agar, Mannitol Salt agar, Blood agar
Biological concepts:
Normal flora, bacterial colonies, hemolysis, Gram-positive and Gram-negative bacteria
Laboratory context:
Teaching laboratory
Associated organisms:
Staphylococcus, Streptococcus, Enterobacteriaceae
Intended audience:
Students enrolled in a microbiology laboratory course
Temporal context:
Multi-week laboratory sequence
Instructional purpose:
Observation and analysis of bacterial growth on culture media
Year:
2023
Region / City:
Not specified
Topic:
Microbiology, Genetic Engineering
Document Type:
Supplementary Information
Organization / Institution:
Not specified
Author:
Wolf M, Geczi A, Simon O, Borriss R
Target Audience:
Researchers in microbiology and genetic engineering
Effective Period:
Not specified
Approval Date:
Not specified
Date of Changes:
Not specified
Year:
2026
Institution:
University of Leicester
College:
College of Life Sciences
School/Department:
LeMID
Funding:
CLS / HPRU Grant studentship
First Supervisor:
Prof Julie Morrissey
Second Supervisor:
Dr Emma Marczylo, UK Health Security Agency (UKHSA)
Additional Supervisors:
Kate Jones, Health and Safety Executive; Emma-Jane Goode
Project Type:
PhD research project
Field:
Microbiology / Public Health
Focus:
Metal exposure, bacterial persistence, antimicrobial resistance
Target Organisms:
Staphylococcus aureus (CA-MRSA and HA-MRSA)
Training Provided:
Molecular microbiology, tissue culture, omics, microscopy
Collaborating Organizations:
Health Protection Research Unit, National Institute of Health Research (NIHR), Health and Safety Executive, UKHSA